dbCAN HGM

Cluster: Rep_2157_CGC13

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_2157_c_0	Rep_2157_c_0_668	743018	744511	+	GH77
CAZyme	Rep_2157_c_0	Rep_2157_c_0_669	744629	746878	+	GT35
TF	Rep_2157_c_0	Rep_2157_c_0_670	747084	748601	+	HTH_AraC
TC	Rep_2157_c_0	Rep_2157_c_0_671	748660	750372	+	8.A.59.2.1
STP	Rep_2157_c_0	Rep_2157_c_0_672	750673	751974	+	SBP_bac_1
TC	Rep_2157_c_0	Rep_2157_c_0_673	752081	753475	+	3.A.1.1.27
TC	Rep_2157_c_0	Rep_2157_c_0_674	753475	754353	+	3.A.1.1.27
TC	Rep_2157_c_0	Rep_2157_c_0_675	754404	756101	+	3.A.1.1.9
pfam	Rep_2157_c_0	Rep_2157_c_0_676	756104	756802	+	Hydrolase \| Hydrolase_like \| HAD_2
TC	Rep_2157_c_0	Rep_2157_c_0_677	756854	758182	-	2.A.66.1.37
TF	Rep_2157_c_0	Rep_2157_c_0_678	758173	758637	-	0040517
pfam	Rep_2157_c_0	Rep_2157_c_0_679	758997	759797	+	adh_short \| KR \| adh_short_C2
TC	Rep_2157_c_0	Rep_2157_c_0_680	760221	762617	+	3.A.3.23.2

Gene ID: Rep_2157_c_0_668
Type: CAZyme
Location: 743018 - 744511 (+)

Gene ID: Rep_2157_c_0_669
Type: CAZyme
Location: 744629 - 746878 (+)

Gene ID: Rep_2157_c_0_670
Type: TF
Location: 747084 - 748601 (+)

Gene ID: Rep_2157_c_0_671
Type: TC
Location: 748660 - 750372 (+)

Gene ID: Rep_2157_c_0_672
Type: STP
Location: 750673 - 751974 (+)

Gene ID: Rep_2157_c_0_673
Type: TC
Location: 752081 - 753475 (+)

Gene ID: Rep_2157_c_0_674
Type: TC
Location: 753475 - 754353 (+)

Gene ID: Rep_2157_c_0_675
Type: TC
Location: 754404 - 756101 (+)

Gene ID: Rep_2157_c_0_676
Type: pfam
Location: 756104 - 756802 (+)

Gene ID: Rep_2157_c_0_677
Type: TC
Location: 756854 - 758182 (-)

Gene ID: Rep_2157_c_0_678
Type: TF
Location: 758173 - 758637 (-)

Gene ID: Rep_2157_c_0_679
Type: pfam
Location: 758997 - 759797 (+)

Gene ID: Rep_2157_c_0_680
Type: TC
Location: 760221 - 762617 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2157_c_0_677	vegetarian > vegan	1.44458	0.02176

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_2157_c_0_668	vegan > omnivore	1.37729	0.00021
Rep_2157_c_0_670	flexitarian > omnivore	2.82631	0.04735
Rep_2157_c_0_670	vegan > omnivore	3.09540	0.00021
Rep_2157_c_0_671	flexitarian > omnivore	2.23979	0.04735
Rep_2157_c_0_671	vegan > omnivore	2.25965	0.00021
Rep_2157_c_0_673	flexitarian > omnivore	2.38385	0.04735
Rep_2157_c_0_673	vegan > omnivore	2.06949	0.00021
Rep_2157_c_0_674	vegan > omnivore	2.13452	0.00021
Rep_2157_c_0_675	flexitarian > omnivore	3.05411	0.04735
Rep_2157_c_0_675	vegan > omnivore	2.66236	0.00021
Rep_2157_c_0_676	vegan > omnivore	3.78856	0.00021
Rep_2157_c_0_677	vegan > omnivore	3.70562	0.00021
Rep_2157_c_0_678	vegan > flexitarian	1.50419	0.02963
Rep_2157_c_0_678	vegan > omnivore	2.56969	0.00021
Rep_2157_c_0_680	flexitarian > omnivore	2.74952	0.04735
Rep_2157_c_0_680	vegan > omnivore	3.06860	0.00021