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Cluster: Rep_2157_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2157_c_0 Rep_2157_c_0_819 919045 922299 + CBM13
pfam Rep_2157_c_0 Rep_2157_c_0_820 922527 922994 + Fic
pfam Rep_2157_c_0 Rep_2157_c_0_821 922995 923420 + Fic-like_C
CAZyme Rep_2157_c_0 Rep_2157_c_0_822 923546 926314 + GH3
TC Rep_2157_c_0 Rep_2157_c_0_823 926647 927579 + 2.A.4.7.9
TF Rep_2157_c_0 Rep_2157_c_0_824 927976 928725 + HTH_DeoR
STP Rep_2157_c_0 Rep_2157_c_0_825 928725 929627 + PfkB
TC Rep_2157_c_0 Rep_2157_c_0_826 929731 931797 + 4.A.2.1.20
STP Rep_2157_c_0 Rep_2157_c_0_827 932199 932462 + PTS-HPr
TC Rep_2157_c_0 Rep_2157_c_0_828 932598 934301 + 8.A.7.1.1
Gene ID: Rep_2157_c_0_819
Type: CAZyme
Location: 919045 - 922299 (+)
Gene ID: Rep_2157_c_0_820
Type: pfam
Location: 922527 - 922994 (+)
Gene ID: Rep_2157_c_0_821
Type: pfam
Location: 922995 - 923420 (+)
Gene ID: Rep_2157_c_0_822
Type: CAZyme
Location: 923546 - 926314 (+)
Gene ID: Rep_2157_c_0_823
Type: TC
Location: 926647 - 927579 (+)
Gene ID: Rep_2157_c_0_824
Type: TF
Location: 927976 - 928725 (+)
Gene ID: Rep_2157_c_0_825
Type: STP
Location: 928725 - 929627 (+)
Gene ID: Rep_2157_c_0_826
Type: TC
Location: 929731 - 931797 (+)
Gene ID: Rep_2157_c_0_827
Type: STP
Location: 932199 - 932462 (+)
Gene ID: Rep_2157_c_0_828
Type: TC
Location: 932598 - 934301 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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