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Genome Details

Selected Rep_genome_ID: Rep_170
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
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Phylum
Bacteroidota
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Class
Bacteroidia
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Order
Bacteroidales
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Family
Bacteroidaceae
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Genus
Prevotella
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Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
Rep_170 3,294,508 96.2923% 0.555556% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_170_CGC34 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_170_CGC35 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_170_CGC14 CGCFAM_00003 Yes 5 2
Rep_170_CGC20 CGCFAM_00017 Yes 9 3 fructan
Rep_170_CGC28 CGCFAM_00028 Yes 4 3
Rep_170_CGC9 CGCFAM_00044 Yes 10 5 beta-mannan/xylan/beta-glucan
Rep_170_CGC12 CGCFAM_00048 Yes 12 4
Rep_170_CGC22 CGCFAM_00116 Yes 9 4 xylan/beta-glucan
Rep_170_CGC23 CGCFAM_00136 Yes 5 2 pectin
Rep_170_CGC31 CGCFAM_00146 Yes 5 2
Rep_170_CGC7 CGCFAM_00180 Yes 8 4
Rep_170_CGC3 CGCFAM_00192 Yes 6 1
Rep_170_CGC26 CGCFAM_00241 Yes 6 3
Rep_170_CGC17 CGCFAM_00306 Yes 11 7
Rep_170_CGC27 CGCFAM_00603 Yes 5 2
Rep_170_CGC19 CGCFAM_00757 Yes 6 1
Rep_170_CGC13 CGCFAM_00996 Yes 3 1
Rep_170_CGC8 CGCFAM_01612 Yes 5 1
Rep_170_CGC32 CGCFAM_02255 Yes 4 1
Rep_170_CGC21 CGCFAM_02563 Yes 6 2
Rep_170_CGC24 CGCFAM_03412 Yes 7 3
Rep_170_CGC5 CGCFAM_03891 Yes 6 2
Rep_170_CGC16 CGCFAM_07029 Yes 8 4
Rep_170_CGC11 CGCFAM_08047 Yes 11 2
Rep_170_CGC1 CGCFAM_11237 Yes 5 1
Top CAZyme Families