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Cluster: Rep_170_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_170_c_77 Rep_170_c_77_9 16709 18721 + GH67
CAZyme Rep_170_c_77 Rep_170_c_77_10 18721 20412 + GH35
TC Rep_170_c_77 Rep_170_c_77_11 20564 23713 + 1.B.14.6.1
pfam Rep_170_c_77 Rep_170_c_77_12 23760 25535 + SusD_RagB | SusD-like_3
pfam Rep_170_c_77 Rep_170_c_77_13 25552 26928 + SGBP_B_XBD
CAZyme Rep_170_c_77 Rep_170_c_77_14 26965 29367 + GH10
pfam Rep_170_c_77 Rep_170_c_77_15 29381 30616 + Lipase_GDSL | Lipase_GDSL_2
TC Rep_170_c_77 Rep_170_c_77_16 30630 32045 + 2.A.2.3.2
CAZyme Rep_170_c_77 Rep_170_c_77_17 32093 33202 + GH10
CAZyme Rep_170_c_77 Rep_170_c_77_18 33223 34191 + GH43_1
Gene ID: Rep_170_c_77_9
Type: CAZyme
Location: 16709 - 18721 (+)
Gene ID: Rep_170_c_77_10
Type: CAZyme
Location: 18721 - 20412 (+)
Gene ID: Rep_170_c_77_11
Type: TC
Location: 20564 - 23713 (+)
Gene ID: Rep_170_c_77_12
Type: pfam
Location: 23760 - 25535 (+)
Gene ID: Rep_170_c_77_13
Type: pfam
Location: 25552 - 26928 (+)
Gene ID: Rep_170_c_77_14
Type: CAZyme
Location: 26965 - 29367 (+)
Gene ID: Rep_170_c_77_15
Type: pfam
Location: 29381 - 30616 (+)
Gene ID: Rep_170_c_77_16
Type: TC
Location: 30630 - 32045 (+)
Gene ID: Rep_170_c_77_17
Type: CAZyme
Location: 32093 - 33202 (+)
Gene ID: Rep_170_c_77_18
Type: CAZyme
Location: 33223 - 34191 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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