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Cluster: Rep_170_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_170_c_119 Rep_170_c_119_17 20795 21436 - 9.B.18.1.3
CAZyme Rep_170_c_119 Rep_170_c_119_18 21580 22395 - GT2
pfam Rep_170_c_119 Rep_170_c_119_19 22742 23713 + Acyl_transf_3
CAZyme Rep_170_c_119 Rep_170_c_119_20 23781 24572 + GH16_3
CAZyme Rep_170_c_119 Rep_170_c_119_21 24578 25633 - GT4
pfam Rep_170_c_119 Rep_170_c_119_22 25648 26574 - C5-epim_C
pfam Rep_170_c_119 Rep_170_c_119_23 26588 27739 - Glyco_tran_WbsX
CAZyme Rep_170_c_119 Rep_170_c_119_24 27817 28953 - GT4
Gene ID: Rep_170_c_119_17
Type: TC
Location: 20795 - 21436 (-)
Gene ID: Rep_170_c_119_18
Type: CAZyme
Location: 21580 - 22395 (-)
Gene ID: Rep_170_c_119_19
Type: pfam
Location: 22742 - 23713 (+)
Gene ID: Rep_170_c_119_20
Type: CAZyme
Location: 23781 - 24572 (+)
Gene ID: Rep_170_c_119_21
Type: CAZyme
Location: 24578 - 25633 (-)
Gene ID: Rep_170_c_119_22
Type: pfam
Location: 25648 - 26574 (-)
Gene ID: Rep_170_c_119_23
Type: pfam
Location: 26588 - 27739 (-)
Gene ID: Rep_170_c_119_24
Type: CAZyme
Location: 27817 - 28953 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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