Cluster: Rep_170_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_170
- CGC Family ID: CGCFAM_00241
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_170_c_166 | Rep_170_c_166_4 | 2379 | 3731 | - | 2.A.2.3.5 |
| NULL(UNKNOWN) | Rep_170_c_166 | Rep_170_c_166_5 | 3805 | 3906 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_170_c_166 | Rep_170_c_166_6 | 4135 | 5307 | - | GH130_1 |
| CAZyme | Rep_170_c_166 | Rep_170_c_166_7 | 5355 | 7670 | - | CE7 | GH26 |
| NULL(UNKNOWN) | Rep_170_c_166 | Rep_170_c_166_8 | 7895 | 9064 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_170_c_166 | Rep_170_c_166_9 | 9102 | 10382 | - | GH5_7 |
Gene ID: Rep_170_c_166_4
Type: TC
Location: 2379 - 3731 (-)
Type: TC
Location: 2379 - 3731 (-)
Gene ID: Rep_170_c_166_5
Type:
Location: 3805 - 3906 (-)
Type:
Location: 3805 - 3906 (-)
Gene ID: Rep_170_c_166_6
Type: CAZyme
Location: 4135 - 5307 (-)
Type: CAZyme
Location: 4135 - 5307 (-)
Gene ID: Rep_170_c_166_7
Type: CAZyme
Location: 5355 - 7670 (-)
Type: CAZyme
Location: 5355 - 7670 (-)
Gene ID: Rep_170_c_166_8
Type:
Location: 7895 - 9064 (-)
Type:
Location: 7895 - 9064 (-)
Gene ID: Rep_170_c_166_9
Type: CAZyme
Location: 9102 - 10382 (-)
Type: CAZyme
Location: 9102 - 10382 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.