Cluster: Rep_170_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_170
- CGC Family ID: CGCFAM_01612
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_170_c_58 | Rep_170_c_58_6 | 5097 | 6326 | + | 9.B.156.3.1 |
| NULL(UNKNOWN) | Rep_170_c_58 | Rep_170_c_58_7 | 6382 | 7893 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | Rep_170_c_58 | Rep_170_c_58_8 | 7916 | 10030 | + | S46.UPW |
| CAZyme | Rep_170_c_58 | Rep_170_c_58_9 | 10177 | 13044 | + | GH2 |
| TC | Rep_170_c_58 | Rep_170_c_58_10 | 13110 | 15080 | - | 3.A.18.1.1 |
Gene ID: Rep_170_c_58_6
Type: TC
Location: 5097 - 6326 (+)
Type: TC
Location: 5097 - 6326 (+)
Gene ID: Rep_170_c_58_7
Type:
Location: 6382 - 7893 (+)
Type:
Location: 6382 - 7893 (+)
Gene ID: Rep_170_c_58_8
Type: peptidase
Location: 7916 - 10030 (+)
Type: peptidase
Location: 7916 - 10030 (+)
Gene ID: Rep_170_c_58_9
Type: CAZyme
Location: 10177 - 13044 (+)
Type: CAZyme
Location: 10177 - 13044 (+)
Gene ID: Rep_170_c_58_10
Type: TC
Location: 13110 - 15080 (-)
Type: TC
Location: 13110 - 15080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.