dbCAN Logo

Cluster: Rep_170_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_170_c_86 Rep_170_c_86_4 5021 6214 - CE1
CAZyme Rep_170_c_86 Rep_170_c_86_5 6669 8720 - GH13_6
pfam Rep_170_c_86 Rep_170_c_86_6 8877 10271 - SusF_N
pfam Rep_170_c_86 Rep_170_c_86_7 10307 11455 - SusE | SusF_SusE
TC Rep_170_c_86 Rep_170_c_86_8 11495 13213 - 8.A.46.1.1
TC Rep_170_c_86 Rep_170_c_86_9 13229 16246 - 1.B.14.6.1
TF Rep_170_c_86 Rep_170_c_86_10 16578 17612 + LacI
TC Rep_170_c_86 Rep_170_c_86_11 17612 18937 + 2.A.2.6.2
pfam Rep_170_c_86 Rep_170_c_86_12 19147 20478 - OEP | OEP
pfam Rep_170_c_86 Rep_170_c_86_13 20492 21601 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC Rep_170_c_86 Rep_170_c_86_14 21616 22920 - 3.A.1.122.2
Gene ID: Rep_170_c_86_4
Type: CAZyme
Location: 5021 - 6214 (-)
Gene ID: Rep_170_c_86_5
Type: CAZyme
Location: 6669 - 8720 (-)
Gene ID: Rep_170_c_86_6
Type: pfam
Location: 8877 - 10271 (-)
Gene ID: Rep_170_c_86_7
Type: pfam
Location: 10307 - 11455 (-)
Gene ID: Rep_170_c_86_8
Type: TC
Location: 11495 - 13213 (-)
Gene ID: Rep_170_c_86_9
Type: TC
Location: 13229 - 16246 (-)
Gene ID: Rep_170_c_86_10
Type: TF
Location: 16578 - 17612 (+)
Gene ID: Rep_170_c_86_11
Type: TC
Location: 17612 - 18937 (+)
Gene ID: Rep_170_c_86_12
Type: pfam
Location: 19147 - 20478 (-)
Gene ID: Rep_170_c_86_13
Type: pfam
Location: 20492 - 21601 (-)
Gene ID: Rep_170_c_86_14
Type: TC
Location: 21616 - 22920 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List