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Cluster: Rep_170_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_170_c_122 Rep_170_c_122_1 56 1432 + 2.A.1.1.74
CAZyme Rep_170_c_122 Rep_170_c_122_2 1416 3548 + GH78
CAZyme Rep_170_c_122 Rep_170_c_122_3 3634 6255 + GH138
CAZyme Rep_170_c_122 Rep_170_c_122_4 6319 10509 + CBM57 | CBM97 | GH137 | GH2
CAZyme Rep_170_c_122 Rep_170_c_122_5 10516 13659 + GH2
NULL(UNKNOWN) Rep_170_c_122 Rep_170_c_122_6 14110 14325 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_170_c_122 Rep_170_c_122_7 14418 16523 + GH2
TC Rep_170_c_122 Rep_170_c_122_8 16823 19972 + 1.B.14.6.1
TC Rep_170_c_122 Rep_170_c_122_9 19995 21614 + 8.A.46.1.3
CAZyme Rep_170_c_122 Rep_170_c_122_10 21737 22954 + CE15
CAZyme Rep_170_c_122 Rep_170_c_122_11 23093 25408 + GH139
Gene ID: Rep_170_c_122_1
Type: TC
Location: 56 - 1432 (+)
Gene ID: Rep_170_c_122_2
Type: CAZyme
Location: 1416 - 3548 (+)
Gene ID: Rep_170_c_122_3
Type: CAZyme
Location: 3634 - 6255 (+)
Gene ID: Rep_170_c_122_4
Type: CAZyme
Location: 6319 - 10509 (+)
Gene ID: Rep_170_c_122_5
Type: CAZyme
Location: 10516 - 13659 (+)
Gene ID: Rep_170_c_122_6
Type:
Location: 14110 - 14325 (+)
Gene ID: Rep_170_c_122_7
Type: CAZyme
Location: 14418 - 16523 (+)
Gene ID: Rep_170_c_122_8
Type: TC
Location: 16823 - 19972 (+)
Gene ID: Rep_170_c_122_9
Type: TC
Location: 19995 - 21614 (+)
Gene ID: Rep_170_c_122_10
Type: CAZyme
Location: 21737 - 22954 (+)
Gene ID: Rep_170_c_122_11
Type: CAZyme
Location: 23093 - 25408 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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