Cluster: Rep_170_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_170
- CGC Family ID: CGCFAM_00180
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_170_c_46 | Rep_170_c_46_2 | 1517 | 3346 | + | 3.A.1.106.1 |
| pfam | Rep_170_c_46 | Rep_170_c_46_3 | 3374 | 4318 | + | Lip_A_acyltrans |
| CAZyme | Rep_170_c_46 | Rep_170_c_46_4 | 4345 | 5157 | - | GT11 |
| pfam | Rep_170_c_46 | Rep_170_c_46_5 | 5188 | 7308 | - | Sulfatase |
| CAZyme | Rep_170_c_46 | Rep_170_c_46_6 | 7448 | 8650 | + | GT4 |
| pfam | Rep_170_c_46 | Rep_170_c_46_7 | 8682 | 10334 | + | PMT_2 |
| CAZyme | Rep_170_c_46 | Rep_170_c_46_8 | 10341 | 11111 | - | GT2 |
| CAZyme | Rep_170_c_46 | Rep_170_c_46_9 | 11108 | 11851 | - | GT32 |
Gene ID: Rep_170_c_46_2
Type: TC
Location: 1517 - 3346 (+)
Type: TC
Location: 1517 - 3346 (+)
Gene ID: Rep_170_c_46_3
Type: pfam
Location: 3374 - 4318 (+)
Type: pfam
Location: 3374 - 4318 (+)
Gene ID: Rep_170_c_46_4
Type: CAZyme
Location: 4345 - 5157 (-)
Type: CAZyme
Location: 4345 - 5157 (-)
Gene ID: Rep_170_c_46_5
Type: pfam
Location: 5188 - 7308 (-)
Type: pfam
Location: 5188 - 7308 (-)
Gene ID: Rep_170_c_46_6
Type: CAZyme
Location: 7448 - 8650 (+)
Type: CAZyme
Location: 7448 - 8650 (+)
Gene ID: Rep_170_c_46_7
Type: pfam
Location: 8682 - 10334 (+)
Type: pfam
Location: 8682 - 10334 (+)
Gene ID: Rep_170_c_46_8
Type: CAZyme
Location: 10341 - 11111 (-)
Type: CAZyme
Location: 10341 - 11111 (-)
Gene ID: Rep_170_c_46_9
Type: CAZyme
Location: 11108 - 11851 (-)
Type: CAZyme
Location: 11108 - 11851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.