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Cluster: Rep_170_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_170_c_147 Rep_170_c_147_5 4684 8274 + CBM91 | GH43_10 | GH5_21
TC Rep_170_c_147 Rep_170_c_147_6 8536 11676 + 1.B.14.6.1
pfam Rep_170_c_147 Rep_170_c_147_7 11788 13716 + SusD_RagB | SusD-like_3
TC Rep_170_c_147 Rep_170_c_147_8 13733 16531 + 1.B.14.6.1
pfam Rep_170_c_147 Rep_170_c_147_9 16591 18459 + SusD_RagB | SusD-like_3
pfam Rep_170_c_147 Rep_170_c_147_10 18487 19581 + BT_3987-like_N | DUF5627
CAZyme Rep_170_c_147 Rep_170_c_147_11 19594 21252 + GH10
CAZyme Rep_170_c_147 Rep_170_c_147_12 21286 22917 + CBM91 | GH43_10
CAZyme Rep_170_c_147 Rep_170_c_147_13 22914 24611 + CBM91 | GH43_12
Gene ID: Rep_170_c_147_5
Type: CAZyme
Location: 4684 - 8274 (+)
Gene ID: Rep_170_c_147_6
Type: TC
Location: 8536 - 11676 (+)
Gene ID: Rep_170_c_147_7
Type: pfam
Location: 11788 - 13716 (+)
Gene ID: Rep_170_c_147_8
Type: TC
Location: 13733 - 16531 (+)
Gene ID: Rep_170_c_147_9
Type: pfam
Location: 16591 - 18459 (+)
Gene ID: Rep_170_c_147_10
Type: pfam
Location: 18487 - 19581 (+)
Gene ID: Rep_170_c_147_11
Type: CAZyme
Location: 19594 - 21252 (+)
Gene ID: Rep_170_c_147_12
Type: CAZyme
Location: 21286 - 22917 (+)
Gene ID: Rep_170_c_147_13
Type: CAZyme
Location: 22914 - 24611 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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