Genome Details
Selected Rep_genome_ID: HRGMv2_4578
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4578 | 2,882,417 | 98.23% | 0.722% | Tanzania | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_PheChl_Fiber-Hadza-Nepal_C_4_2225.347 | 2,277,272 | 93.27% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4578_CGC12 | CGCFAM_00010 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_4578_CGC31 | CGCFAM_00063 | Yes | 4 | 1 | |
| HRGMv2_4578_CGC3 | CGCFAM_00252 | Yes | 7 | 1 | |
| HRGMv2_4578_CGC34 | CGCFAM_00342 | Yes | 3 | 1 | |
| HRGMv2_4578_CGC4 | CGCFAM_01090 | Yes | 7 | 1 | |
| HRGMv2_4578_CGC16 | CGCFAM_01321 | Yes | 20 | 1 | |
| HRGMv2_4578_CGC23 | CGCFAM_02902 | Yes | 12 | 1 | |
| HRGMv2_4578_CGC9 | CGCFAM_03136 | Yes | 4 | 1 | |
| HRGMv2_4578_CGC20 | CGCFAM_04710 | Yes | 6 | 1 | |
| HRGMv2_4578_CGC13 | CGCFAM_05327 | Yes | 5 | 1 | |
| HRGMv2_4578_CGC25 | CGCFAM_10175 | Yes | 4 | 1 |
Top CAZyme Families