Cluster: HRGMv2_4578_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- CGC Family ID: CGCFAM_05327
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4578_8 | HRGMv2_4578_8_46 | 61910 | 63298 | + | 2.A.2.3.5 |
| peptidase | HRGMv2_4578_8 | HRGMv2_4578_8_47 | 63302 | 64057 | + | S09.UPW |
| STP | HRGMv2_4578_8 | HRGMv2_4578_8_48 | 64085 | 66010 | + | Pyr_redox_2 |
| TC | HRGMv2_4578_8 | HRGMv2_4578_8_49 | 66124 | 67560 | - | 2.A.66.1.32 |
| CAZyme | HRGMv2_4578_8 | HRGMv2_4578_8_50 | 67851 | 68648 | + | CBM13 |
Gene ID: HRGMv2_4578_8_46
Type: TC
Location: 61910 - 63298 (+)
Type: TC
Location: 61910 - 63298 (+)
Gene ID: HRGMv2_4578_8_47
Type: peptidase
Location: 63302 - 64057 (+)
Type: peptidase
Location: 63302 - 64057 (+)
Gene ID: HRGMv2_4578_8_48
Type: STP
Location: 64085 - 66010 (+)
Type: STP
Location: 64085 - 66010 (+)
Gene ID: HRGMv2_4578_8_49
Type: TC
Location: 66124 - 67560 (-)
Type: TC
Location: 66124 - 67560 (-)
Gene ID: HRGMv2_4578_8_50
Type: CAZyme
Location: 67851 - 68648 (+)
Type: CAZyme
Location: 67851 - 68648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.