Cluster: HRGMv2_4578_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- CGC Family ID: CGCFAM_00063
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4578_78 | HRGMv2_4578_78_1 | 3 | 1097 | - | GT35 |
| TF | HRGMv2_4578_78 | HRGMv2_4578_78_2 | 1227 | 2084 | + | HTH_AraC | HTH_AraC |
| TF | HRGMv2_4578_78 | HRGMv2_4578_78_3 | 2145 | 3170 | - | LacI |
| TC | HRGMv2_4578_78 | HRGMv2_4578_78_4 | 3462 | 5144 | + | 4.A.1.1.11 |
Gene ID: HRGMv2_4578_78_1
Type: CAZyme
Location: 3 - 1097 (-)
Type: CAZyme
Location: 3 - 1097 (-)
Gene ID: HRGMv2_4578_78_2
Type: TF
Location: 1227 - 2084 (+)
Type: TF
Location: 1227 - 2084 (+)
Gene ID: HRGMv2_4578_78_3
Type: TF
Location: 2145 - 3170 (-)
Type: TF
Location: 2145 - 3170 (-)
Gene ID: HRGMv2_4578_78_4
Type: TC
Location: 3462 - 5144 (+)
Type: TC
Location: 3462 - 5144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.