Cluster: HRGMv2_4578_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- CGC Family ID: CGCFAM_03136
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4578_5 | HRGMv2_4578_5_79 | 89384 | 90703 | + | 2.A.23.1.8 |
| pfam | HRGMv2_4578_5 | HRGMv2_4578_5_80 | 91019 | 91852 | - | S6PP | Hydrolase_3 |
| CAZyme | HRGMv2_4578_5 | HRGMv2_4578_5_81 | 91866 | 93542 | - | GH25 |
| TC | HRGMv2_4578_5 | HRGMv2_4578_5_82 | 94029 | 95087 | + | 9.A.23.1.1 |
Gene ID: HRGMv2_4578_5_79
Type: TC
Location: 89384 - 90703 (+)
Type: TC
Location: 89384 - 90703 (+)
Gene ID: HRGMv2_4578_5_80
Type: pfam
Location: 91019 - 91852 (-)
Type: pfam
Location: 91019 - 91852 (-)
Gene ID: HRGMv2_4578_5_81
Type: CAZyme
Location: 91866 - 93542 (-)
Type: CAZyme
Location: 91866 - 93542 (-)
Gene ID: HRGMv2_4578_5_82
Type: TC
Location: 94029 - 95087 (+)
Type: TC
Location: 94029 - 95087 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.