Cluster: HRGMv2_4578_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4578
- CGC Family ID: CGCFAM_10175
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4578_35 | HRGMv2_4578_35_5 | 2717 | 4363 | + | 8.A.7.1.1 |
| TC | HRGMv2_4578_35 | HRGMv2_4578_35_6 | 4516 | 5706 | + | 2.A.4.7.7 |
| STP | HRGMv2_4578_35 | HRGMv2_4578_35_7 | 5728 | 6912 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_4578_35 | HRGMv2_4578_35_8 | 7034 | 8803 | + | GH2 |
Gene ID: HRGMv2_4578_35_5
Type: TC
Location: 2717 - 4363 (+)
Type: TC
Location: 2717 - 4363 (+)
Gene ID: HRGMv2_4578_35_6
Type: TC
Location: 4516 - 5706 (+)
Type: TC
Location: 4516 - 5706 (+)
Gene ID: HRGMv2_4578_35_7
Type: STP
Location: 5728 - 6912 (+)
Type: STP
Location: 5728 - 6912 (+)
Gene ID: HRGMv2_4578_35_8
Type: CAZyme
Location: 7034 - 8803 (+)
Type: CAZyme
Location: 7034 - 8803 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium sp934533135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.