Genome Details
Selected Rep_genome_ID: HRGMv2_3177
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF018_bin.37_sub | 2,096,519 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_3177 | 2,046,679 | 99.32% | 0% | Congo | Africa | HRGM |
| MGYG000004520 | 2,155,170 | 98.66% | 0.02% | Israel | Asia | UHGG |
| Rep_3440 | 2,040,270 | 98.6577% | 0.671141% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3177_CGC6 | CGCFAM_00117 | Yes | 4 | 1 | alpha-glucan |
| HRGMv2_3177_CGC4 | CGCFAM_00357 | Yes | 5 | 1 | |
| HRGMv2_3177_CGC5 | CGCFAM_00392 | Yes | 6 | 1 | |
| HRGMv2_3177_CGC15 | CGCFAM_00833 | Yes | 5 | 1 | |
| HRGMv2_3177_CGC7 | CGCFAM_01735 | Yes | 5 | 2 | |
| HRGMv2_3177_CGC1 | CGCFAM_02144 | Yes | 4 | 1 | |
| HRGMv2_3177_CGC2 | CGCFAM_03599 | Yes | 4 | 1 | |
| HRGMv2_3177_CGC9 | CGCFAM_05223 | Yes | 6 | 1 | |
| HRGMv2_3177_CGC12 | CGCFAM_10322 | Yes | 12 | 4 | |
| HRGMv2_3177_CGC3 | CGCFAM_10323 | Yes | 6 | 1 |
Top CAZyme Families