Cluster: HRGMv2_3177_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3177
- CGC Family ID: CGCFAM_00117
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3177_9 | HRGMv2_3177_9_3 | 2297 | 3961 | - | GH13_36 |
| TC | HRGMv2_3177_9 | HRGMv2_3177_9_4 | 4105 | 4968 | - | 3.A.1.1.27 |
| TC | HRGMv2_3177_9 | HRGMv2_3177_9_5 | 4965 | 6467 | - | 3.A.1.1.27 |
| TC | HRGMv2_3177_9 | HRGMv2_3177_9_6 | 6660 | 7979 | - | 3.A.1.1.27 |
Gene ID: HRGMv2_3177_9_3
Type: CAZyme
Location: 2297 - 3961 (-)
Type: CAZyme
Location: 2297 - 3961 (-)
Gene ID: HRGMv2_3177_9_4
Type: TC
Location: 4105 - 4968 (-)
Type: TC
Location: 4105 - 4968 (-)
Gene ID: HRGMv2_3177_9_5
Type: TC
Location: 4965 - 6467 (-)
Type: TC
Location: 4965 - 6467 (-)
Gene ID: HRGMv2_3177_9_6
Type: TC
Location: 6660 - 7979 (-)
Type: TC
Location: 6660 - 7979 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.