Cluster: HRGMv2_3177_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3177
- CGC Family ID: CGCFAM_00357
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3177_5 | HRGMv2_3177_5_61 | 63802 | 66207 | - | GH13_28 |
| TC | HRGMv2_3177_5 | HRGMv2_3177_5_62 | 66495 | 67907 | + | 3.A.1.11.8 |
| TC | HRGMv2_3177_5 | HRGMv2_3177_5_63 | 67909 | 68700 | + | 3.A.1.11.2 |
| TC | HRGMv2_3177_5 | HRGMv2_3177_5_64 | 68697 | 69512 | + | 3.A.1.11.8 |
| TC | HRGMv2_3177_5 | HRGMv2_3177_5_65 | 69537 | 70616 | + | 3.A.1.11.7 |
Gene ID: HRGMv2_3177_5_61
Type: CAZyme
Location: 63802 - 66207 (-)
Type: CAZyme
Location: 63802 - 66207 (-)
Gene ID: HRGMv2_3177_5_62
Type: TC
Location: 66495 - 67907 (+)
Type: TC
Location: 66495 - 67907 (+)
Gene ID: HRGMv2_3177_5_63
Type: TC
Location: 67909 - 68700 (+)
Type: TC
Location: 67909 - 68700 (+)
Gene ID: HRGMv2_3177_5_64
Type: TC
Location: 68697 - 69512 (+)
Type: TC
Location: 68697 - 69512 (+)
Gene ID: HRGMv2_3177_5_65
Type: TC
Location: 69537 - 70616 (+)
Type: TC
Location: 69537 - 70616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.