Cluster: HRGMv2_3177_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3177
- CGC Family ID: CGCFAM_00392
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3177_7 | HRGMv2_3177_7_3 | 5120 | 6259 | - | GH25 |
| TC | HRGMv2_3177_7 | HRGMv2_3177_7_4 | 6262 | 6465 | - | 1.E.18.1.3 |
| pfam | HRGMv2_3177_7 | HRGMv2_3177_7_5 | 6671 | 7213 | + | DUF436 |
| TC | HRGMv2_3177_7 | HRGMv2_3177_7_6 | 7362 | 8234 | - | 3.A.1.1.45 |
| TC | HRGMv2_3177_7 | HRGMv2_3177_7_7 | 8234 | 9109 | - | 3.A.1.1.45 |
| TC | HRGMv2_3177_7 | HRGMv2_3177_7_8 | 9195 | 10556 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_3177_7_3
Type: CAZyme
Location: 5120 - 6259 (-)
Type: CAZyme
Location: 5120 - 6259 (-)
Gene ID: HRGMv2_3177_7_4
Type: TC
Location: 6262 - 6465 (-)
Type: TC
Location: 6262 - 6465 (-)
Gene ID: HRGMv2_3177_7_5
Type: pfam
Location: 6671 - 7213 (+)
Type: pfam
Location: 6671 - 7213 (+)
Gene ID: HRGMv2_3177_7_6
Type: TC
Location: 7362 - 8234 (-)
Type: TC
Location: 7362 - 8234 (-)
Gene ID: HRGMv2_3177_7_7
Type: TC
Location: 8234 - 9109 (-)
Type: TC
Location: 8234 - 9109 (-)
Gene ID: HRGMv2_3177_7_8
Type: TC
Location: 9195 - 10556 (-)
Type: TC
Location: 9195 - 10556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.