Cluster: HRGMv2_3177_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3177
- CGC Family ID: CGCFAM_03599
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3177_2 | HRGMv2_3177_2_37 | 48938 | 50020 | + | GT2 |
| pfam | HRGMv2_3177_2 | HRGMv2_3177_2_38 | 50022 | 50906 | + | LicD |
| pfam | HRGMv2_3177_2 | HRGMv2_3177_2_39 | 50890 | 51621 | + | DNA_alkylation |
| TC | HRGMv2_3177_2 | HRGMv2_3177_2_40 | 52033 | 52674 | + | 2.A.87.1.3 |
Gene ID: HRGMv2_3177_2_37
Type: CAZyme
Location: 48938 - 50020 (+)
Type: CAZyme
Location: 48938 - 50020 (+)
Gene ID: HRGMv2_3177_2_38
Type: pfam
Location: 50022 - 50906 (+)
Type: pfam
Location: 50022 - 50906 (+)
Gene ID: HRGMv2_3177_2_39
Type: pfam
Location: 50890 - 51621 (+)
Type: pfam
Location: 50890 - 51621 (+)
Gene ID: HRGMv2_3177_2_40
Type: TC
Location: 52033 - 52674 (+)
Type: TC
Location: 52033 - 52674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.