Cluster: HRGMv2_3177_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3177
- CGC Family ID: CGCFAM_01735
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3177_11 | HRGMv2_3177_11_10 | 13096 | 14040 | - | GT2 |
| pfam | HRGMv2_3177_11 | HRGMv2_3177_11_11 | 14259 | 15227 | + | PFK |
| pfam | HRGMv2_3177_11 | HRGMv2_3177_11_12 | 15325 | 16770 | + | MORN | MORN |
| TC | HRGMv2_3177_11 | HRGMv2_3177_11_13 | 16763 | 17569 | + | 1.A.23.2.1 |
| CAZyme | HRGMv2_3177_11 | HRGMv2_3177_11_14 | 17677 | 18666 | - | CE1 |
Gene ID: HRGMv2_3177_11_10
Type: CAZyme
Location: 13096 - 14040 (-)
Type: CAZyme
Location: 13096 - 14040 (-)
Gene ID: HRGMv2_3177_11_11
Type: pfam
Location: 14259 - 15227 (+)
Type: pfam
Location: 14259 - 15227 (+)
Gene ID: HRGMv2_3177_11_12
Type: pfam
Location: 15325 - 16770 (+)
Type: pfam
Location: 15325 - 16770 (+)
Gene ID: HRGMv2_3177_11_13
Type: TC
Location: 16763 - 17569 (+)
Type: TC
Location: 16763 - 17569 (+)
Gene ID: HRGMv2_3177_11_14
Type: CAZyme
Location: 17677 - 18666 (-)
Type: CAZyme
Location: 17677 - 18666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.