Genome Details
Selected Rep_genome_ID: HRGMv2_2284
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus caecimuris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B111.bin_51 | 2,269,617 | 92.91% | 1.58% | China(Inner Mongolia) | Asia | IMGG |
| CGMR090423 | 2,218,826 | 90.83% | 0.17% | China | Asia | CGMR |
| HRGMv2_2284 | 2,507,287 | 99.32% | 0% | South Korea | Asia | HRGM |
| MGYG000002974 | 2,263,240 | 95.45% | 0% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2284_CGC5 | CGCFAM_00009 | Yes | 9 | 4 | |
| HRGMv2_2284_CGC16 | CGCFAM_00086 | Yes | 3 | 1 | |
| HRGMv2_2284_CGC2 | CGCFAM_01033 | Yes | 9 | 2 | |
| HRGMv2_2284_CGC6 | CGCFAM_02430 | Yes | 11 | 2 | |
| HRGMv2_2284_CGC1 | CGCFAM_02615 | Yes | 4 | 1 | |
| HRGMv2_2284_CGC11 | CGCFAM_02895 | Yes | 8 | 1 | |
| HRGMv2_2284_CGC15 | CGCFAM_04044 | Yes | 7 | 1 | |
| HRGMv2_2284_CGC13 | CGCFAM_04045 | Yes | 9 | 1 | |
| HRGMv2_2284_CGC14 | CGCFAM_04046 | Yes | 21 | 4 | |
| HRGMv2_2284_CGC10 | CGCFAM_04047 | Yes | 5 | 1 | |
| HRGMv2_2284_CGC3 | CGCFAM_05068 | Yes | 22 | 10 |
Top CAZyme Families