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Cluster: HRGMv2_2284_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2284_1 HRGMv2_2284_1_270 255016 256191 - CE9
CAZyme HRGMv2_2284_1 HRGMv2_2284_1_271 256191 257645 - GH165
pfam HRGMv2_2284_1 HRGMv2_2284_1_272 257674 258591 - DHDPS
pfam HRGMv2_2284_1 HRGMv2_2284_1_273 258623 259075 - DUF386
TC HRGMv2_2284_1 HRGMv2_2284_1_274 259072 260091 - 3.A.1.5.20
TC HRGMv2_2284_1 HRGMv2_2284_1_275 260093 261121 - 3.A.1.5.12
TC HRGMv2_2284_1 HRGMv2_2284_1_276 261133 262020 - 3.A.1.5.20
TC HRGMv2_2284_1 HRGMv2_2284_1_277 262038 262997 - 3.A.1.5.20
TC HRGMv2_2284_1 HRGMv2_2284_1_278 263133 264740 - 3.A.1.5.18
Gene ID: HRGMv2_2284_1_270
Type: CAZyme
Location: 255016 - 256191 (-)
Gene ID: HRGMv2_2284_1_271
Type: CAZyme
Location: 256191 - 257645 (-)
Gene ID: HRGMv2_2284_1_272
Type: pfam
Location: 257674 - 258591 (-)
Gene ID: HRGMv2_2284_1_273
Type: pfam
Location: 258623 - 259075 (-)
Gene ID: HRGMv2_2284_1_274
Type: TC
Location: 259072 - 260091 (-)
Gene ID: HRGMv2_2284_1_275
Type: TC
Location: 260093 - 261121 (-)
Gene ID: HRGMv2_2284_1_276
Type: TC
Location: 261133 - 262020 (-)
Gene ID: HRGMv2_2284_1_277
Type: TC
Location: 262038 - 262997 (-)
Gene ID: HRGMv2_2284_1_278
Type: TC
Location: 263133 - 264740 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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