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Cluster: HRGMv2_2284_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2284_3 HRGMv2_2284_3_112 112228 113406 + 3.A.4.1.2
TC HRGMv2_2284_3 HRGMv2_2284_3_113 113414 114580 + 3.A.4.1.2
pfam HRGMv2_2284_3 HRGMv2_2284_3_114 114599 115804 + MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_2284_3 HRGMv2_2284_3_115 116320 117309 + GT2
CAZyme HRGMv2_2284_3 HRGMv2_2284_3_116 117381 118385 + GT2
TC HRGMv2_2284_3 HRGMv2_2284_3_117 118410 119198 + 3.A.1.103.6
TC HRGMv2_2284_3 HRGMv2_2284_3_118 119210 119950 + 3.A.1.103.1
CAZyme HRGMv2_2284_3 HRGMv2_2284_3_119 119962 121161 + GT2
CAZyme HRGMv2_2284_3 HRGMv2_2284_3_120 121134 122078 + GT2
Gene ID: HRGMv2_2284_3_112
Type: TC
Location: 112228 - 113406 (+)
Gene ID: HRGMv2_2284_3_113
Type: TC
Location: 113414 - 114580 (+)
Gene ID: HRGMv2_2284_3_114
Type: pfam
Location: 114599 - 115804 (+)
Gene ID: HRGMv2_2284_3_115
Type: CAZyme
Location: 116320 - 117309 (+)
Gene ID: HRGMv2_2284_3_116
Type: CAZyme
Location: 117381 - 118385 (+)
Gene ID: HRGMv2_2284_3_117
Type: TC
Location: 118410 - 119198 (+)
Gene ID: HRGMv2_2284_3_118
Type: TC
Location: 119210 - 119950 (+)
Gene ID: HRGMv2_2284_3_119
Type: CAZyme
Location: 119962 - 121161 (+)
Gene ID: HRGMv2_2284_3_120
Type: CAZyme
Location: 121134 - 122078 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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