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Cluster: HRGMv2_2284_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2284_16 HRGMv2_2284_16_33 36204 37460 - GT2
pfam HRGMv2_2284_16 HRGMv2_2284_16_34 37703 38953 + DUF1015
TC HRGMv2_2284_16 HRGMv2_2284_16_35 39035 39763 - 3.A.1.12.3
TC HRGMv2_2284_16 HRGMv2_2284_16_36 39779 40723 - 3.A.1.12.3
TC HRGMv2_2284_16 HRGMv2_2284_16_37 40726 41370 - 3.A.1.12.8
TC HRGMv2_2284_16 HRGMv2_2284_16_38 41382 42449 - 3.A.1.11.7
TC HRGMv2_2284_16 HRGMv2_2284_16_39 42463 43245 - 3.A.1.11.2
TC HRGMv2_2284_16 HRGMv2_2284_16_40 43239 44057 - 3.A.1.11.8
TC HRGMv2_2284_16 HRGMv2_2284_16_41 44050 45126 - 3.A.1.11.8
Gene ID: HRGMv2_2284_16_33
Type: CAZyme
Location: 36204 - 37460 (-)
Gene ID: HRGMv2_2284_16_34
Type: pfam
Location: 37703 - 38953 (+)
Gene ID: HRGMv2_2284_16_35
Type: TC
Location: 39035 - 39763 (-)
Gene ID: HRGMv2_2284_16_36
Type: TC
Location: 39779 - 40723 (-)
Gene ID: HRGMv2_2284_16_37
Type: TC
Location: 40726 - 41370 (-)
Gene ID: HRGMv2_2284_16_38
Type: TC
Location: 41382 - 42449 (-)
Gene ID: HRGMv2_2284_16_39
Type: TC
Location: 42463 - 43245 (-)
Gene ID: HRGMv2_2284_16_40
Type: TC
Location: 43239 - 44057 (-)
Gene ID: HRGMv2_2284_16_41
Type: TC
Location: 44050 - 45126 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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