Cluster: HRGMv2_2284_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2284
- CGC Family ID: CGCFAM_02615
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2284_1 | HRGMv2_2284_1_262 | 246272 | 246757 | - | 2.A.115.2.14 |
| CAZyme | HRGMv2_2284_1 | HRGMv2_2284_1_263 | 246918 | 247742 | + | CE4 |
| TC | HRGMv2_2284_1 | HRGMv2_2284_1_264 | 247822 | 249888 | - | 3.A.1.134.9 |
| TC | HRGMv2_2284_1 | HRGMv2_2284_1_265 | 249885 | 250649 | - | 3.A.1.134.4 |
Gene ID: HRGMv2_2284_1_262
Type: TC
Location: 246272 - 246757 (-)
Type: TC
Location: 246272 - 246757 (-)
Gene ID: HRGMv2_2284_1_263
Type: CAZyme
Location: 246918 - 247742 (+)
Type: CAZyme
Location: 246918 - 247742 (+)
Gene ID: HRGMv2_2284_1_264
Type: TC
Location: 247822 - 249888 (-)
Type: TC
Location: 247822 - 249888 (-)
Gene ID: HRGMv2_2284_1_265
Type: TC
Location: 249885 - 250649 (-)
Type: TC
Location: 249885 - 250649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.