Cluster: HRGMv2_2284_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2284
- CGC Family ID: CGCFAM_04047
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2284_8 | HRGMv2_2284_8_84 | 95857 | 96831 | + | GT2 |
| pfam | HRGMv2_2284_8 | HRGMv2_2284_8_85 | 96996 | 97658 | + | TENA_THI-4 |
| TC | HRGMv2_2284_8 | HRGMv2_2284_8_86 | 97662 | 98411 | + | 3.A.1.17.8 |
| TC | HRGMv2_2284_8 | HRGMv2_2284_8_87 | 98413 | 99156 | + | 3.A.1.17.8 |
| TC | HRGMv2_2284_8 | HRGMv2_2284_8_88 | 99153 | 100214 | + | 3.A.1.17.6 |
Gene ID: HRGMv2_2284_8_84
Type: CAZyme
Location: 95857 - 96831 (+)
Type: CAZyme
Location: 95857 - 96831 (+)
Gene ID: HRGMv2_2284_8_85
Type: pfam
Location: 96996 - 97658 (+)
Type: pfam
Location: 96996 - 97658 (+)
Gene ID: HRGMv2_2284_8_86
Type: TC
Location: 97662 - 98411 (+)
Type: TC
Location: 97662 - 98411 (+)
Gene ID: HRGMv2_2284_8_87
Type: TC
Location: 98413 - 99156 (+)
Type: TC
Location: 98413 - 99156 (+)
Gene ID: HRGMv2_2284_8_88
Type: TC
Location: 99153 - 100214 (+)
Type: TC
Location: 99153 - 100214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.