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Cluster: HRGMv2_2284_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2284_22 HRGMv2_2284_22_11 8798 10234 + GT5
pfam HRGMv2_2284_22 HRGMv2_2284_22_12 10231 11166 + EamA | EamA
TC HRGMv2_2284_22 HRGMv2_2284_22_13 11347 12942 + 3.A.1.5.17
TC HRGMv2_2284_22 HRGMv2_2284_22_14 12955 13902 + 3.A.1.5.11
TC HRGMv2_2284_22 HRGMv2_2284_22_15 13902 14753 + 3.A.1.5.38
TC HRGMv2_2284_22 HRGMv2_2284_22_16 14755 15762 + 3.A.1.5.2
TC HRGMv2_2284_22 HRGMv2_2284_22_17 15755 16519 + 3.A.1.5.32
Gene ID: HRGMv2_2284_22_11
Type: CAZyme
Location: 8798 - 10234 (+)
Gene ID: HRGMv2_2284_22_12
Type: pfam
Location: 10231 - 11166 (+)
Gene ID: HRGMv2_2284_22_13
Type: TC
Location: 11347 - 12942 (+)
Gene ID: HRGMv2_2284_22_14
Type: TC
Location: 12955 - 13902 (+)
Gene ID: HRGMv2_2284_22_15
Type: TC
Location: 13902 - 14753 (+)
Gene ID: HRGMv2_2284_22_16
Type: TC
Location: 14755 - 15762 (+)
Gene ID: HRGMv2_2284_22_17
Type: TC
Location: 15755 - 16519 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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