Cluster: HRGMv2_2284_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2284
- CGC Family ID: CGCFAM_00086
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2284_24 | HRGMv2_2284_24_29 | 23666 | 25504 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2284_24 | HRGMv2_2284_24_30 | 25876 | 27984 | + | CBM34 | GH13_39 |
| TC | HRGMv2_2284_24 | HRGMv2_2284_24_31 | 28320 | 30491 | + | 4.A.1.1.14 |
Gene ID: HRGMv2_2284_24_29
Type: TC
Location: 23666 - 25504 (+)
Type: TC
Location: 23666 - 25504 (+)
Gene ID: HRGMv2_2284_24_30
Type: CAZyme
Location: 25876 - 27984 (+)
Type: CAZyme
Location: 25876 - 27984 (+)
Gene ID: HRGMv2_2284_24_31
Type: TC
Location: 28320 - 30491 (+)
Type: TC
Location: 28320 - 30491 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.