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Cluster: HRGMv2_2284_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2284_9 HRGMv2_2284_9_2 1015 1737 + CE4
pfam HRGMv2_2284_9 HRGMv2_2284_9_3 1771 2685 + AP_endonuc_2
pfam HRGMv2_2284_9 HRGMv2_2284_9_4 2682 3944 + DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC HRGMv2_2284_9 HRGMv2_2284_9_5 4112 5518 + 2.A.25.1.4
TF HRGMv2_2284_9 HRGMv2_2284_9_6 5518 6423 + HTH_1
pfam HRGMv2_2284_9 HRGMv2_2284_9_7 6550 7905 + AcetylCoA_hydro | AcetylCoA_hyd_C
TC HRGMv2_2284_9 HRGMv2_2284_9_8 8043 9908 - 3.A.1.135.5
TC HRGMv2_2284_9 HRGMv2_2284_9_9 9901 11652 - 3.A.1.135.5
Gene ID: HRGMv2_2284_9_2
Type: CAZyme
Location: 1015 - 1737 (+)
Gene ID: HRGMv2_2284_9_3
Type: pfam
Location: 1771 - 2685 (+)
Gene ID: HRGMv2_2284_9_4
Type: pfam
Location: 2682 - 3944 (+)
Gene ID: HRGMv2_2284_9_5
Type: TC
Location: 4112 - 5518 (+)
Gene ID: HRGMv2_2284_9_6
Type: TF
Location: 5518 - 6423 (+)
Gene ID: HRGMv2_2284_9_7
Type: pfam
Location: 6550 - 7905 (+)
Gene ID: HRGMv2_2284_9_8
Type: TC
Location: 8043 - 9908 (-)
Gene ID: HRGMv2_2284_9_9
Type: TC
Location: 9901 - 11652 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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