Genome Details
Selected Rep_genome_ID: HRGMv2_1888
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH227_99 | 2,718,544 | 99.06% | 1.89% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_1888 | 2,199,493 | 100% | 0% | Cameroon | Africa | HRGM |
| MGYG000003653 | 2,060,420 | 99.06% | 0% | Peru | South America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1888_CGC2 | CGCFAM_00020 | Yes | 6 | 3 | host glycan/beta-glucan |
| HRGMv2_1888_CGC6 | CGCFAM_00036 | Yes | 8 | 3 | |
| HRGMv2_1888_CGC10 | CGCFAM_00090 | Yes | 4 | 2 | |
| HRGMv2_1888_CGC21 | CGCFAM_00373 | Yes | 3 | 1 | |
| HRGMv2_1888_CGC13 | CGCFAM_01206 | Yes | 5 | 1 | |
| HRGMv2_1888_CGC20 | CGCFAM_01942 | Yes | 3 | 1 | |
| HRGMv2_1888_CGC19 | CGCFAM_02352 | Yes | 4 | 1 | |
| HRGMv2_1888_CGC5 | CGCFAM_03310 | Yes | 6 | 3 | |
| HRGMv2_1888_CGC9 | CGCFAM_05423 | Yes | 9 | 3 | |
| HRGMv2_1888_CGC8 | CGCFAM_05785 | Yes | 4 | 1 |
Top CAZyme Families