Cluster: HRGMv2_1888_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- CGC Family ID: CGCFAM_00373
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_104 | HRGMv2_1888_104_2 | 1663 | 3138 | - | GH1 |
| TF | HRGMv2_1888_104 | HRGMv2_1888_104_3 | 3261 | 4007 | + | HTH_6 |
| TC | HRGMv2_1888_104 | HRGMv2_1888_104_4 | 4052 | 5677 | - | 2.A.53.3.9 |
Gene ID: HRGMv2_1888_104_2
Type: CAZyme
Location: 1663 - 3138 (-)
Type: CAZyme
Location: 1663 - 3138 (-)
Gene ID: HRGMv2_1888_104_3
Type: TF
Location: 3261 - 4007 (+)
Type: TF
Location: 3261 - 4007 (+)
Gene ID: HRGMv2_1888_104_4
Type: TC
Location: 4052 - 5677 (-)
Type: TC
Location: 4052 - 5677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.