Cluster: HRGMv2_1888_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- CGC Family ID: CGCFAM_01942
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_95 | HRGMv2_1888_95_4 | 2742 | 4208 | - | GH1 |
| pfam | HRGMv2_1888_95 | HRGMv2_1888_95_5 | 4304 | 5191 | - | ParBc | HTH_ParB |
| TC | HRGMv2_1888_95 | HRGMv2_1888_95_6 | 5181 | 5951 | - | 3.A.7.11.1 |
Gene ID: HRGMv2_1888_95_4
Type: CAZyme
Location: 2742 - 4208 (-)
Type: CAZyme
Location: 2742 - 4208 (-)
Gene ID: HRGMv2_1888_95_5
Type: pfam
Location: 4304 - 5191 (-)
Type: pfam
Location: 4304 - 5191 (-)
Gene ID: HRGMv2_1888_95_6
Type: TC
Location: 5181 - 5951 (-)
Type: TC
Location: 5181 - 5951 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.