Cluster: HRGMv2_1888_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1888
- CGC Family ID: CGCFAM_00090
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_26 | HRGMv2_1888_26_17 | 16514 | 18196 | + | GH13_29 |
| TC | HRGMv2_1888_26 | HRGMv2_1888_26_18 | 18202 | 19554 | + | 4.A.1.2.9 |
| TC | HRGMv2_1888_26 | HRGMv2_1888_26_19 | 19769 | 20125 | + | 4.A.1.1.6 |
| CAZyme | HRGMv2_1888_26 | HRGMv2_1888_26_20 | 20134 | 21582 | + | GH32 |
Gene ID: HRGMv2_1888_26_17
Type: CAZyme
Location: 16514 - 18196 (+)
Type: CAZyme
Location: 16514 - 18196 (+)
Gene ID: HRGMv2_1888_26_18
Type: TC
Location: 18202 - 19554 (+)
Type: TC
Location: 18202 - 19554 (+)
Gene ID: HRGMv2_1888_26_19
Type: TC
Location: 19769 - 20125 (+)
Type: TC
Location: 19769 - 20125 (+)
Gene ID: HRGMv2_1888_26_20
Type: CAZyme
Location: 20134 - 21582 (+)
Type: CAZyme
Location: 20134 - 21582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.