Genome Details
Selected Rep_genome_ID: HRGMv2_1733
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio porci
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1733 | 3,227,090 | 99.4% | 0% | UK | Europe | HRGM |
| MGYG000002846 | 3,432,213 | 99.41% | 0.59% | United States | North America | UHGG |
| Rep_2743 | 3,291,044 | 99.1124% | 0.591716% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1733_CGC3 | CGCFAM_00013 | Yes | 4 | 1 | |
| HRGMv2_1733_CGC6 | CGCFAM_00119 | Yes | 14 | 4 | |
| HRGMv2_1733_CGC12 | CGCFAM_00140 | Yes | 4 | 2 | |
| HRGMv2_1733_CGC25 | CGCFAM_00919 | Yes | 6 | 1 | |
| HRGMv2_1733_CGC4 | CGCFAM_01838 | Yes | 5 | 2 | |
| HRGMv2_1733_CGC19 | CGCFAM_02882 | Yes | 4 | 1 | |
| HRGMv2_1733_CGC5 | CGCFAM_03259 | Yes | 4 | 1 | |
| HRGMv2_1733_CGC21 | CGCFAM_04581 | Yes | 11 | 1 | |
| HRGMv2_1733_CGC9 | CGCFAM_05207 | Yes | 10 | 2 | |
| HRGMv2_1733_CGC15 | CGCFAM_06525 | Yes | 6 | 1 | |
| HRGMv2_1733_CGC20 | CGCFAM_07975 | Yes | 3 | 1 | |
| HRGMv2_1733_CGC8 | CGCFAM_08788 | Yes | 8 | 2 | |
| HRGMv2_1733_CGC10 | CGCFAM_09849 | Yes | 4 | 1 | |
| HRGMv2_1733_CGC13 | CGCFAM_09850 | Yes | 14 | 1 | |
| HRGMv2_1733_CGC16 | CGCFAM_09851 | Yes | 4 | 1 | |
| HRGMv2_1733_CGC23 | CGCFAM_09852 | Yes | 6 | 1 | |
| HRGMv2_1733_CGC7 | CGCFAM_09853 | Yes | 11 | 3 |
Top CAZyme Families