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Cluster: HRGMv2_1733_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_36 HRGMv2_1733_36_5 4342 5208 - 2.A.115.1.5
TC HRGMv2_1733_36 HRGMv2_1733_36_6 5216 6013 - 2.A.102.4.1
STP HRGMv2_1733_36 HRGMv2_1733_36_7 6273 6980 - FeS
pfam HRGMv2_1733_36 HRGMv2_1733_36_8 7399 7800 - ATP-synt_DE | ATP-synt_DE_N
TC HRGMv2_1733_36 HRGMv2_1733_36_9 7835 9256 - 3.A.2.1.7
TC HRGMv2_1733_36 HRGMv2_1733_36_10 9267 10151 - 3.A.2.1.7
TC HRGMv2_1733_36 HRGMv2_1733_36_11 10175 11683 - 3.A.2.1.2
TC HRGMv2_1733_36 HRGMv2_1733_36_12 11687 12238 - 3.A.2.1.2
pfam HRGMv2_1733_36 HRGMv2_1733_36_13 12235 12810 - ATP-synt_B
pfam HRGMv2_1733_36 HRGMv2_1733_36_14 12962 13381 - ATP-synt_B
CAZyme HRGMv2_1733_36 HRGMv2_1733_36_15 13591 14631 - GT2
Gene ID: HRGMv2_1733_36_5
Type: TC
Location: 4342 - 5208 (-)
Gene ID: HRGMv2_1733_36_6
Type: TC
Location: 5216 - 6013 (-)
Gene ID: HRGMv2_1733_36_7
Type: STP
Location: 6273 - 6980 (-)
Gene ID: HRGMv2_1733_36_8
Type: pfam
Location: 7399 - 7800 (-)
Gene ID: HRGMv2_1733_36_9
Type: TC
Location: 7835 - 9256 (-)
Gene ID: HRGMv2_1733_36_10
Type: TC
Location: 9267 - 10151 (-)
Gene ID: HRGMv2_1733_36_11
Type: TC
Location: 10175 - 11683 (-)
Gene ID: HRGMv2_1733_36_12
Type: TC
Location: 11687 - 12238 (-)
Gene ID: HRGMv2_1733_36_13
Type: pfam
Location: 12235 - 12810 (-)
Gene ID: HRGMv2_1733_36_14
Type: pfam
Location: 12962 - 13381 (-)
Gene ID: HRGMv2_1733_36_15
Type: CAZyme
Location: 13591 - 14631 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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