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Cluster: HRGMv2_1733_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_7 HRGMv2_1733_7_11 13233 13943 - 3.A.1.4.10
TC HRGMv2_1733_7 HRGMv2_1733_7_12 13946 14716 - 3.A.1.4.10
TC HRGMv2_1733_7 HRGMv2_1733_7_13 14713 15711 - 3.A.1.4.8
TC HRGMv2_1733_7 HRGMv2_1733_7_14 15708 16613 - 3.A.1.4.8
TC HRGMv2_1733_7 HRGMv2_1733_7_15 16817 17938 - 3.A.1.4.8
CAZyme HRGMv2_1733_7 HRGMv2_1733_7_16 18353 20428 + GH133
CAZyme HRGMv2_1733_7 HRGMv2_1733_7_17 20542 21861 + GT4
CAZyme HRGMv2_1733_7 HRGMv2_1733_7_18 21861 23171 + GH57
CAZyme HRGMv2_1733_7 HRGMv2_1733_7_19 23291 27550 + GT3 | GT35
TC HRGMv2_1733_7 HRGMv2_1733_7_20 27962 29530 + 3.A.1.5.28
TC HRGMv2_1733_7 HRGMv2_1733_7_21 29613 30593 + 3.A.1.5.39
TC HRGMv2_1733_7 HRGMv2_1733_7_22 30625 31539 + 3.A.1.5.39
TC HRGMv2_1733_7 HRGMv2_1733_7_23 31536 32564 + 3.A.1.5.20
TC HRGMv2_1733_7 HRGMv2_1733_7_24 32545 33546 + 3.A.1.5.35
Gene ID: HRGMv2_1733_7_11
Type: TC
Location: 13233 - 13943 (-)
Gene ID: HRGMv2_1733_7_12
Type: TC
Location: 13946 - 14716 (-)
Gene ID: HRGMv2_1733_7_13
Type: TC
Location: 14713 - 15711 (-)
Gene ID: HRGMv2_1733_7_14
Type: TC
Location: 15708 - 16613 (-)
Gene ID: HRGMv2_1733_7_15
Type: TC
Location: 16817 - 17938 (-)
Gene ID: HRGMv2_1733_7_16
Type: CAZyme
Location: 18353 - 20428 (+)
Gene ID: HRGMv2_1733_7_17
Type: CAZyme
Location: 20542 - 21861 (+)
Gene ID: HRGMv2_1733_7_18
Type: CAZyme
Location: 21861 - 23171 (+)
Gene ID: HRGMv2_1733_7_19
Type: CAZyme
Location: 23291 - 27550 (+)
Gene ID: HRGMv2_1733_7_20
Type: TC
Location: 27962 - 29530 (+)
Gene ID: HRGMv2_1733_7_21
Type: TC
Location: 29613 - 30593 (+)
Gene ID: HRGMv2_1733_7_22
Type: TC
Location: 30625 - 31539 (+)
Gene ID: HRGMv2_1733_7_23
Type: TC
Location: 31536 - 32564 (+)
Gene ID: HRGMv2_1733_7_24
Type: TC
Location: 32545 - 33546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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