Cluster: HRGMv2_1733_CGC7
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1733
- CGC Family ID: CGCFAM_09853
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1733_9 | HRGMv2_1733_9_4 | 1800 | 4070 | - | 3.D.1.9.2 |
| NULL(UNKNOWN) | HRGMv2_1733_9 | HRGMv2_1733_9_5 | 4133 | 4579 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1733_9 | HRGMv2_1733_9_6 | 4576 | 5148 | - | Cytochrom_NNT | Mtrc-MtrF_II-IV_dom |
| TC | HRGMv2_1733_9 | HRGMv2_1733_9_7 | 5653 | 7761 | - | 9.B.34.1.2 |
| STP | HRGMv2_1733_9 | HRGMv2_1733_9_8 | 7996 | 8970 | - | Glucokinase |
| STP | HRGMv2_1733_9 | HRGMv2_1733_9_9 | 9023 | 10474 | - | PfkB |
| CAZyme | HRGMv2_1733_9 | HRGMv2_1733_9_10 | 10519 | 12489 | - | GT4 |
| TC | HRGMv2_1733_9 | HRGMv2_1733_9_11 | 12500 | 13690 | - | 3.A.1.122.12 |
| CAZyme | HRGMv2_1733_9 | HRGMv2_1733_9_12 | 13838 | 15013 | - | GT21 |
| NULL(UNKNOWN) | HRGMv2_1733_9 | HRGMv2_1733_9_13 | 15030 | 15545 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1733_9 | HRGMv2_1733_9_14 | 15542 | 16666 | - | GT4 |
Gene ID: HRGMv2_1733_9_4
Type: TC
Location: 1800 - 4070 (-)
Type: TC
Location: 1800 - 4070 (-)
Gene ID: HRGMv2_1733_9_5
Type:
Location: 4133 - 4579 (-)
Type:
Location: 4133 - 4579 (-)
Gene ID: HRGMv2_1733_9_6
Type: pfam
Location: 4576 - 5148 (-)
Type: pfam
Location: 4576 - 5148 (-)
Gene ID: HRGMv2_1733_9_7
Type: TC
Location: 5653 - 7761 (-)
Type: TC
Location: 5653 - 7761 (-)
Gene ID: HRGMv2_1733_9_8
Type: STP
Location: 7996 - 8970 (-)
Type: STP
Location: 7996 - 8970 (-)
Gene ID: HRGMv2_1733_9_9
Type: STP
Location: 9023 - 10474 (-)
Type: STP
Location: 9023 - 10474 (-)
Gene ID: HRGMv2_1733_9_10
Type: CAZyme
Location: 10519 - 12489 (-)
Type: CAZyme
Location: 10519 - 12489 (-)
Gene ID: HRGMv2_1733_9_11
Type: TC
Location: 12500 - 13690 (-)
Type: TC
Location: 12500 - 13690 (-)
Gene ID: HRGMv2_1733_9_12
Type: CAZyme
Location: 13838 - 15013 (-)
Type: CAZyme
Location: 13838 - 15013 (-)
Gene ID: HRGMv2_1733_9_13
Type:
Location: 15030 - 15545 (-)
Type:
Location: 15030 - 15545 (-)
Gene ID: HRGMv2_1733_9_14
Type: CAZyme
Location: 15542 - 16666 (-)
Type: CAZyme
Location: 15542 - 16666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Species
Desulfovibrio porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.