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Cluster: HRGMv2_1733_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_15 HRGMv2_1733_15_57 60896 61474 + 3.A.6.2.1
TC HRGMv2_1733_15 HRGMv2_1733_15_58 62029 62826 + 3.A.6.2.1
TC HRGMv2_1733_15 HRGMv2_1733_15_59 62850 63119 + 3.A.6.2.1
pfam HRGMv2_1733_15 HRGMv2_1733_15_60 63162 63731 - Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4
pfam HRGMv2_1733_15 HRGMv2_1733_15_61 64136 64927 - SpoU_methylase | SpoU_sub_bind
CAZyme HRGMv2_1733_15 HRGMv2_1733_15_62 65067 66722 + GH23
Gene ID: HRGMv2_1733_15_57
Type: TC
Location: 60896 - 61474 (+)
Gene ID: HRGMv2_1733_15_58
Type: TC
Location: 62029 - 62826 (+)
Gene ID: HRGMv2_1733_15_59
Type: TC
Location: 62850 - 63119 (+)
Gene ID: HRGMv2_1733_15_60
Type: pfam
Location: 63162 - 63731 (-)
Gene ID: HRGMv2_1733_15_61
Type: pfam
Location: 64136 - 64927 (-)
Gene ID: HRGMv2_1733_15_62
Type: CAZyme
Location: 65067 - 66722 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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