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Cluster: HRGMv2_1733_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_9 HRGMv2_1733_9_72 79177 80334 + 3.A.1.4.1
TC HRGMv2_1733_9 HRGMv2_1733_9_73 80526 81434 + 3.A.1.4.8
TC HRGMv2_1733_9 HRGMv2_1733_9_74 81437 82657 + 3.A.1.4.8
TC HRGMv2_1733_9 HRGMv2_1733_9_75 82654 83439 + 3.A.1.4.1
TC HRGMv2_1733_9 HRGMv2_1733_9_76 83432 84136 + 3.A.1.4.8
pfam HRGMv2_1733_9 HRGMv2_1733_9_77 84279 84698 - PNPOx_N | Pyrid_ox_like
CAZyme HRGMv2_1733_9 HRGMv2_1733_9_78 84861 85946 - GT1
CAZyme HRGMv2_1733_9 HRGMv2_1733_9_79 86140 87156 + GT2
Gene ID: HRGMv2_1733_9_72
Type: TC
Location: 79177 - 80334 (+)
Gene ID: HRGMv2_1733_9_73
Type: TC
Location: 80526 - 81434 (+)
Gene ID: HRGMv2_1733_9_74
Type: TC
Location: 81437 - 82657 (+)
Gene ID: HRGMv2_1733_9_75
Type: TC
Location: 82654 - 83439 (+)
Gene ID: HRGMv2_1733_9_76
Type: TC
Location: 83432 - 84136 (+)
Gene ID: HRGMv2_1733_9_77
Type: pfam
Location: 84279 - 84698 (-)
Gene ID: HRGMv2_1733_9_78
Type: CAZyme
Location: 84861 - 85946 (-)
Gene ID: HRGMv2_1733_9_79
Type: CAZyme
Location: 86140 - 87156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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