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Cluster: HRGMv2_1733_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1733_61 HRGMv2_1733_61_5 6459 7574 + GT4
TC HRGMv2_1733_61 HRGMv2_1733_61_6 7568 8983 - 9.B.18.1.2
TC HRGMv2_1733_61 HRGMv2_1733_61_7 9286 10035 + 3.A.1.3.17
TC HRGMv2_1733_61 HRGMv2_1733_61_8 10195 10887 + 3.A.1.3.23
TC HRGMv2_1733_61 HRGMv2_1733_61_9 10891 11649 + 3.A.1.3.24
TC HRGMv2_1733_61 HRGMv2_1733_61_10 11665 12333 + 3.A.1.3.2
Gene ID: HRGMv2_1733_61_5
Type: CAZyme
Location: 6459 - 7574 (+)
Gene ID: HRGMv2_1733_61_6
Type: TC
Location: 7568 - 8983 (-)
Gene ID: HRGMv2_1733_61_7
Type: TC
Location: 9286 - 10035 (+)
Gene ID: HRGMv2_1733_61_8
Type: TC
Location: 10195 - 10887 (+)
Gene ID: HRGMv2_1733_61_9
Type: TC
Location: 10891 - 11649 (+)
Gene ID: HRGMv2_1733_61_10
Type: TC
Location: 11665 - 12333 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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