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Cluster: HRGMv2_1733_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1733_13 HRGMv2_1733_13_30 37423 38721 - 2.A.56.1.4
TC HRGMv2_1733_13 HRGMv2_1733_13_31 38731 39201 - 2.A.56.1.4
TC HRGMv2_1733_13 HRGMv2_1733_13_32 39287 40369 - 2.A.56.1.2
NULL(UNKNOWN) HRGMv2_1733_13 HRGMv2_1733_13_33 40448 41419 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1733_13 HRGMv2_1733_13_34 41556 43859 - GT51
peptidase HRGMv2_1733_13 HRGMv2_1733_13_35 43888 49800 - I39.UPW
TC HRGMv2_1733_13 HRGMv2_1733_13_36 50101 51456 + 2.A.66.1.33
pfam HRGMv2_1733_13 HRGMv2_1733_13_37 51464 52510 - DUF1848
TC HRGMv2_1733_13 HRGMv2_1733_13_38 52477 53340 - 3.A.1.15.13
TC HRGMv2_1733_13 HRGMv2_1733_13_39 53333 54313 - 3.A.1.15.5
TC HRGMv2_1733_13 HRGMv2_1733_13_40 54255 55250 - 3.A.1.15.1
pfam HRGMv2_1733_13 HRGMv2_1733_13_41 55485 56321 + Aldo_ket_red
TC HRGMv2_1733_13 HRGMv2_1733_13_42 56429 57178 - 5.A.3.3.2
TC HRGMv2_1733_13 HRGMv2_1733_13_43 57181 59577 - 5.A.3.2.1
Gene ID: HRGMv2_1733_13_30
Type: TC
Location: 37423 - 38721 (-)
Gene ID: HRGMv2_1733_13_31
Type: TC
Location: 38731 - 39201 (-)
Gene ID: HRGMv2_1733_13_32
Type: TC
Location: 39287 - 40369 (-)
Gene ID: HRGMv2_1733_13_33
Type:
Location: 40448 - 41419 (-)
Gene ID: HRGMv2_1733_13_34
Type: CAZyme
Location: 41556 - 43859 (-)
Gene ID: HRGMv2_1733_13_35
Type: peptidase
Location: 43888 - 49800 (-)
Gene ID: HRGMv2_1733_13_36
Type: TC
Location: 50101 - 51456 (+)
Gene ID: HRGMv2_1733_13_37
Type: pfam
Location: 51464 - 52510 (-)
Gene ID: HRGMv2_1733_13_38
Type: TC
Location: 52477 - 53340 (-)
Gene ID: HRGMv2_1733_13_39
Type: TC
Location: 53333 - 54313 (-)
Gene ID: HRGMv2_1733_13_40
Type: TC
Location: 54255 - 55250 (-)
Gene ID: HRGMv2_1733_13_41
Type: pfam
Location: 55485 - 56321 (+)
Gene ID: HRGMv2_1733_13_42
Type: TC
Location: 56429 - 57178 (-)
Gene ID: HRGMv2_1733_13_43
Type: TC
Location: 57181 - 59577 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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