Genome Details
Selected Rep_genome_ID: HRGMv2_0825
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BackhedF_2015_ERR525996_bin.1 | 2,850,565 | 98.18% | 0.967% | Sweden | Europe | ELGG |
| CGMR017640 | 2,699,047 | 97.46% | 1.4% | China | Asia | CGMR |
| HRGMv2_0825 | 2,907,745 | 100% | 0.161% | South Korea | Asia | HRGM |
| KY238_40_sub | 3,001,540 | 100% | 0.56% | NA | Africa | H3AfricaPhase2 |
| MGYG000000977 | 2,927,434 | 100% | 0.4% | Australia | Oceania | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0825_CGC9 | CGCFAM_00003 | Yes | 11 | 7 | |
| HRGMv2_0825_CGC33 | CGCFAM_00088 | Yes | 7 | 2 | |
| HRGMv2_0825_CGC11 | CGCFAM_00139 | Yes | 4 | 2 | |
| HRGMv2_0825_CGC19 | CGCFAM_00371 | Yes | 4 | 1 | |
| HRGMv2_0825_CGC23 | CGCFAM_00621 | Yes | 3 | 1 | |
| HRGMv2_0825_CGC18 | CGCFAM_00943 | Yes | 3 | 1 | |
| HRGMv2_0825_CGC29 | CGCFAM_01044 | Yes | 3 | 1 | |
| HRGMv2_0825_CGC14 | CGCFAM_01073 | Yes | 7 | 1 | |
| HRGMv2_0825_CGC12 | CGCFAM_01149 | Yes | 3 | 1 | |
| HRGMv2_0825_CGC22 | CGCFAM_01168 | Yes | 3 | 1 | |
| HRGMv2_0825_CGC8 | CGCFAM_01203 | Yes | 4 | 2 | |
| HRGMv2_0825_CGC32 | CGCFAM_02918 | Yes | 9 | 2 | |
| HRGMv2_0825_CGC20 | CGCFAM_03848 | Yes | 5 | 2 | |
| HRGMv2_0825_CGC21 | CGCFAM_03869 | Yes | 4 | 1 | |
| HRGMv2_0825_CGC15 | CGCFAM_03917 | Yes | 3 | 1 |
Top CAZyme Families