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Cluster: HRGMv2_0825_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_325 397723 399219 - GH77
TF HRGMv2_0825_2 HRGMv2_0825_2_326 399256 400278 - LacI
TC HRGMv2_0825_2 HRGMv2_0825_2_327 400424 401299 - 3.A.1.1.26
TC HRGMv2_0825_2 HRGMv2_0825_2_328 401301 402233 - 3.A.1.1.22
TC HRGMv2_0825_2 HRGMv2_0825_2_329 402337 403584 - 3.A.1.1.22
pfam HRGMv2_0825_2 HRGMv2_0825_2_330 403768 404718 - HTH_30
TC HRGMv2_0825_2 HRGMv2_0825_2_331 404747 405856 - 3.A.1.1.26
Gene ID: HRGMv2_0825_2_325
Type: CAZyme
Location: 397723 - 399219 (-)
Gene ID: HRGMv2_0825_2_326
Type: TF
Location: 399256 - 400278 (-)
Gene ID: HRGMv2_0825_2_327
Type: TC
Location: 400424 - 401299 (-)
Gene ID: HRGMv2_0825_2_328
Type: TC
Location: 401301 - 402233 (-)
Gene ID: HRGMv2_0825_2_329
Type: TC
Location: 402337 - 403584 (-)
Gene ID: HRGMv2_0825_2_330
Type: pfam
Location: 403768 - 404718 (-)
Gene ID: HRGMv2_0825_2_331
Type: TC
Location: 404747 - 405856 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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