Cluster: HRGMv2_0825_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- CGC Family ID: CGCFAM_00371
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_390 | 392437 | 393303 | + | 3.A.1.24.3 |
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_391 | 393339 | 394343 | + | 3.A.1.24.1 |
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_392 | 394362 | 395024 | + | 3.A.1.24.5 |
| CAZyme | HRGMv2_0825_3 | HRGMv2_0825_3_393 | 395035 | 396399 | + | AA4 |
Gene ID: HRGMv2_0825_3_390
Type: TC
Location: 392437 - 393303 (+)
Type: TC
Location: 392437 - 393303 (+)
Gene ID: HRGMv2_0825_3_391
Type: TC
Location: 393339 - 394343 (+)
Type: TC
Location: 393339 - 394343 (+)
Gene ID: HRGMv2_0825_3_392
Type: TC
Location: 394362 - 395024 (+)
Type: TC
Location: 394362 - 395024 (+)
Gene ID: HRGMv2_0825_3_393
Type: CAZyme
Location: 395035 - 396399 (+)
Type: CAZyme
Location: 395035 - 396399 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.