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Cluster: HRGMv2_0825_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0825_9 HRGMv2_0825_9_64 67315 68784 + GH13_18
TF HRGMv2_0825_9 HRGMv2_0825_9_65 68844 69821 - LacI
TF HRGMv2_0825_9 HRGMv2_0825_9_66 69924 70799 - HTH_AraC | HTH_AraC
TC HRGMv2_0825_9 HRGMv2_0825_9_67 70958 71800 - 3.A.1.1.28
TC HRGMv2_0825_9 HRGMv2_0825_9_68 71800 72684 - 3.A.1.1.42
TC HRGMv2_0825_9 HRGMv2_0825_9_69 72717 73994 - 3.A.1.1.28
CAZyme HRGMv2_0825_9 HRGMv2_0825_9_70 74011 76230 - GH36
pfam HRGMv2_0825_9 HRGMv2_0825_9_71 76619 77239 + Thy1
TC HRGMv2_0825_9 HRGMv2_0825_9_72 77406 79259 - 9.A.8.1.5
Gene ID: HRGMv2_0825_9_64
Type: CAZyme
Location: 67315 - 68784 (+)
Gene ID: HRGMv2_0825_9_65
Type: TF
Location: 68844 - 69821 (-)
Gene ID: HRGMv2_0825_9_66
Type: TF
Location: 69924 - 70799 (-)
Gene ID: HRGMv2_0825_9_67
Type: TC
Location: 70958 - 71800 (-)
Gene ID: HRGMv2_0825_9_68
Type: TC
Location: 71800 - 72684 (-)
Gene ID: HRGMv2_0825_9_69
Type: TC
Location: 72717 - 73994 (-)
Gene ID: HRGMv2_0825_9_70
Type: CAZyme
Location: 74011 - 76230 (-)
Gene ID: HRGMv2_0825_9_71
Type: pfam
Location: 76619 - 77239 (+)
Gene ID: HRGMv2_0825_9_72
Type: TC
Location: 77406 - 79259 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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