Cluster: HRGMv2_0825_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0825
- CGC Family ID: CGCFAM_01203
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_2 | HRGMv2_0825_2_18 | 14358 | 16022 | + | 3.A.1.135.5 |
| CAZyme | HRGMv2_0825_2 | HRGMv2_0825_2_19 | 16140 | 16877 | + | GT26 |
| pfam | HRGMv2_0825_2 | HRGMv2_0825_2_20 | 17031 | 18152 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_0825_2 | HRGMv2_0825_2_21 | 18186 | 19265 | + | GT4 |
Gene ID: HRGMv2_0825_2_18
Type: TC
Location: 14358 - 16022 (+)
Type: TC
Location: 14358 - 16022 (+)
Gene ID: HRGMv2_0825_2_19
Type: CAZyme
Location: 16140 - 16877 (+)
Type: CAZyme
Location: 16140 - 16877 (+)
Gene ID: HRGMv2_0825_2_20
Type: pfam
Location: 17031 - 18152 (+)
Type: pfam
Location: 17031 - 18152 (+)
Gene ID: HRGMv2_0825_2_21
Type: CAZyme
Location: 18186 - 19265 (+)
Type: CAZyme
Location: 18186 - 19265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.