Cluster: HRGMv2_0825_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0825
- CGC Family ID: CGCFAM_00139
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0825_2 | HRGMv2_0825_2_180 | 218970 | 220421 | - | GT5 |
| CAZyme | HRGMv2_0825_2 | HRGMv2_0825_2_181 | 220438 | 222831 | - | GH13_9 |
| pfam | HRGMv2_0825_2 | HRGMv2_0825_2_182 | 223137 | 224372 | - | DHHW | ALGX |
| TC | HRGMv2_0825_2 | HRGMv2_0825_2_183 | 224387 | 225781 | - | 2.A.50.2.1 |
Gene ID: HRGMv2_0825_2_180
Type: CAZyme
Location: 218970 - 220421 (-)
Type: CAZyme
Location: 218970 - 220421 (-)
Gene ID: HRGMv2_0825_2_181
Type: CAZyme
Location: 220438 - 222831 (-)
Type: CAZyme
Location: 220438 - 222831 (-)
Gene ID: HRGMv2_0825_2_182
Type: pfam
Location: 223137 - 224372 (-)
Type: pfam
Location: 223137 - 224372 (-)
Gene ID: HRGMv2_0825_2_183
Type: TC
Location: 224387 - 225781 (-)
Type: TC
Location: 224387 - 225781 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.