Cluster: HRGMv2_0825_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0825
- CGC Family ID: CGCFAM_03848
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0825_4 | HRGMv2_0825_4_8 | 5880 | 7454 | + | GH13_5 |
| pfam | HRGMv2_0825_4 | HRGMv2_0825_4_9 | 7573 | 7758 | + | SASP |
| CAZyme | HRGMv2_0825_4 | HRGMv2_0825_4_10 | 7892 | 8872 | - | CE4 |
| pfam | HRGMv2_0825_4 | HRGMv2_0825_4_11 | 9063 | 10196 | + | Metallophos |
| TC | HRGMv2_0825_4 | HRGMv2_0825_4_12 | 10186 | 12921 | + | 1.C.105.2.8 |
Gene ID: HRGMv2_0825_4_8
Type: CAZyme
Location: 5880 - 7454 (+)
Type: CAZyme
Location: 5880 - 7454 (+)
Gene ID: HRGMv2_0825_4_9
Type: pfam
Location: 7573 - 7758 (+)
Type: pfam
Location: 7573 - 7758 (+)
Gene ID: HRGMv2_0825_4_10
Type: CAZyme
Location: 7892 - 8872 (-)
Type: CAZyme
Location: 7892 - 8872 (-)
Gene ID: HRGMv2_0825_4_11
Type: pfam
Location: 9063 - 10196 (+)
Type: pfam
Location: 9063 - 10196 (+)
Gene ID: HRGMv2_0825_4_12
Type: TC
Location: 10186 - 12921 (+)
Type: TC
Location: 10186 - 12921 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.